| structure name | CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8A (AAATTAGTTTGAATTTTGAGCTAATTT) (DNA-binding protein Fis) |
| reference | Hancock et al. 'Plos 11 e0150189 2016 |
| source | Escherichia coli (strain K12) / Escherichia coli (strain K12) / Escherichia coli (strain K12) |
| experiment | X-ray (resolution=2.56, R-factor=0.224) |
| structural superfamily | Homeodomain-like; |
| sequence family | Bacterial regulatory protein, Fis family; |
| multimeric complexes | 3iv5_AB 3jr9_AB 3jra_AB 3jrb_AB 3jrc_AB 3jrd_AB 3jre_AB 3jrf_AB 3jrg_AB 3jrh_AB 3jri_AB 4ihv_AB 4ihw_AB 4ihx_AB 4ihy_AB 5ds9_AB 5dtd_AB 5e3l_AB 5e3m_AB 5e3n_AB 5e3o_AB 6p0s_ABE 6p0t_ABE 6p0u_ABEF |
| redundant complexes | 3iv5_A
3jr9_B
 3jra_A
3jrb_A
3jrc_B
3jrd_A
3jre_A
3jrf_A
3jrg_A
3jrh_A
3jri_B
4ihv_B
4ihw_A
4ihx_B
4ihy_B
5dtd_A
5e3l_A
5e3m_A
5e3n_A
5e3o_B
6p0u_A
6p0s
6p0t
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NRTRK |
Estimated binding specificities ?
| contact |  |
A | 67 0 11 24 9 96 C | 11 0 67 24 67 0 G | 9 96 9 24 11 0 T | 9 0 9 24 9 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: F21 | ||
| CCTCC | PubMed | 5e3o_B(3.56e-04) |
Dendrogram of similar interfaces ?
matrix format------------------NGRG--TTRGKT-- L +-------5ds9_A +-------------1 ----------------RGEC--KG-------- L ! +-------4yrv_B --3 WTQATAVTHTEGITNT--------------KT L ! +-------------6b6h_F +-------2 WTQT--VTHTEG-------------------- L +-------------6c04_F |
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updated Fri Sep 13 19:28:18 2024