3jso_AB : 3D-footprint complex

structure name	CLASSIC PROTEIN WITH A NEW TWIST: CRYSTAL STRUCTURE OF A LEXA REPRESSOR DNA COMPLEX
reference	Zhang et al. Nature 466 883 2010
source	Escherichia coli K-12
experiment	X-ray (resolution=2.29, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3jso_A interface=27,38,39,40,41,43,44, kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSPNAaEEhlkalarkgvieivsgasrgirllglplvgrvaageplieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirng > 3jso_B interface=27,38,39,40,41,43,44, kaltarqqevfdlirdhisqtgmpptRaeiaqrlgfrSPNAaEEhlkalarkgvieivsgasrgirllglplvgrvaageieghyqvdpslfkpnadfllrvsgmsmkdigimdgdllavhktqdvrngqvvvariddevtvarlkkqgnkvellpensefkpivvdlrqqsftieglavgvirngdwl
interface signature	RSPNAEE/RSPNAEE

Estimated binding specificities ?

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# IC=15.699 IC/col=0.981 n_of_columns=16

specificity:

A |   0   0   0   1  96   1  59   1  94  24  57   1  67   0  96   0
C |  96   0   0  28   0  19   1   2   0  24  21   1   0  96   0   0
G |   0   0  96   1   0   4  23   1   0  24  11   0  29   0   0  96
T |   0  96   0  66   0  72  13  92   2  24   7  94   0   0   0   0

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updated Fri Dec 13 15:32:27 2024