3jxc_LR : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE P22 C2 REPRESSOR PROTEIN IN COMPLEX WITH SYNTHETIC OPERATOR 9T IN THE PRESENCE OF TL+
reference	Koudelka et al. J.Mol.Biol. 396 1145 2010
source	Enterobacteria phage P22
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	2r1j_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3jxc_L interface=19,29,30,31,32,34,35,38,40,41, tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd > 3jxc_R interface=19,29,30,31,32,34,35,38,40,41, tqlmgerirarrkklkirQaalgkmvgvSNVAiSQweRsETepngenllalskalqcspdyllkgd
interface signature	QSNVASQRET/QSNVASQRET

Estimated binding specificities ?

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# IC=10.060 IC/col=0.719 n_of_columns=14

specificity:

A |   6   6  96  96   6  24  24  24  24   0   0   6  78  90
C |   6   6   0   0   6  24  24  24  24  90   0   6   6   0
G |   6   6   0   0  84  24  24  24  24   0   0   0   6   6
T |  78  78   0   0   0  24  24  24  24   6  96  84   6   0

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updated Mon Sep 9 18:14:03 2024