interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E.COLI POL II-ABASIC DNA-DATP LT(0, 3) TERNARY COMPLEX
(DNA polymerase II)
referenceYang et al. 'Cell(Cambridge,Mass.)' 139 1279 2009
sourceEscherichia coli
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyRibonuclease H-like;DNA/RNA polymerases;
sequence familyDNA polymerase family B;
reference complex3k59_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRRN

Estimated binding specificities ?

contactlogo
# IC=3.142 IC/col=0.786 n_of_columns=4 specificity:   
A |   0   0  13  54
C |  96   0  13  16
G |   0  96  13  13
T |   0   0  57  13
scan!

home
updated Sun Jun 28 07:29:25 2026