3kmp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SMAD1-MH1/DNA COMPLEX
reference	Baburajendran et al. 'Nucleic 38 3477 2010
source	MUS MUSCULUS
experiment	X-ray (resolution=2.70, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3kmp_A interface=66,68,73, ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves > 3kmp_B interface=65,67,72, tspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves
interface signature	RQK/RQK

Estimated binding specificities ?

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# IC=9.395 IC/col=0.940 n_of_columns=10

specificity:

A |   5   0   2   0   0  96   2  45   0   2
C |   2   0   5  92   0   0   5  16  96   8
G |   2  96  16   2   0   0  50  16   0   5
T |  87   0  73   2  96   0  39  19   0  81

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updated Fri Dec 13 15:47:46 2024