3kmp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SMAD1-MH1/DNA COMPLEX
reference	Baburajendran et al. 'Nucleic 38 3477 2010
source	MUS MUSCULUS
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	SMAD MH1 domain;
reference complex	6fzs_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3kmp_A interface=66,68,73, ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves > 3kmp_B interface=65,67,72, tspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves
interface signature	RQK/RQK

Estimated binding specificities ?

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# IC=8.191 IC/col=0.910 n_of_columns=9

specificity:

A |   0  23  44   0  96   0  57   0  81
C |   0  11  42   0   0   0  14  96   3
G |  96  18   7   0   0  96  14   0   3
T |   0  44   3  96   0   0  11   0   9

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updated Tue Jul 29 21:20:47 2025