interface graph thumbnail
legend  pdf

structure namePOU PROTEIN:DNA COMPLEX
referenceVahokoski et al. 'Nat.Cell 15 295 2013
sourceMus musculus
experimentX-ray (resolution=2.80, R-factor=?)
structural superfamilylambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex8bx1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQSQTTSRLNRVNQ/SQTSRLRVSNQ

Estimated binding specificities ?

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# IC=18.688 IC/col=1.099 n_of_columns=17 specificity:   
A |   4  96   0   5   0   0   4   0   0   0   8   0  96  79  96   0   5
C |  83   0   0   4   0   0  88  84   0   0   9  84   0   4   0   0   4
G |   5   0   0   4   0  96   0   4   0   0   4  12   0   9   0   0  83
T |   4   0  96  83  96   0   4   8  96  96  75   0   0   4   0  96   4
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updated Tue Jul 29 21:35:12 2025