interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MANGANESE AND MK0518 (RALTEGRAVIR)
(INTEGRASE)
referenceCherepanov et al. Nature 464 232 2010
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=3.20, R-factor=0.206)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

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# IC=2.633 IC/col=0.658 n_of_columns=4 specificity:   
A |   3   2   8  45
C |   3   1  70  19
G |  85   1   8  16
T |   5  92  10  16
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updated Thu Sep 12 17:33:00 2024