3laj_BF : 3D-footprint complex

structure name	THE STRUCTURE OF THE INTERMEDIATE COMPLEX OF THE ARGININE REPRESSOR FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO ITS DNA OPERATOR AND L- ARGININE.
reference	Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
source	Mycobacterium tuberculosis
experiment	X-ray (resolution=2.31, R-factor=?)
structural superfamily	C-terminal domain of arginine repressor;"Winged helix" DNA-binding domain;
reference complex	3lap_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3laj_B interface=38,39,40,43,44, aanragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpevsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr > 3laj_F interface=37,38,39,42,43, anragrqarivailssaqvrsqnelaallaaegievTQAtlSRdleelgavklrgadggtgiyvvpedgspvrgvsggtdrmarllgellvstddsgnlavlrtppgaahylasaidraalpqvvgtiagddtilvvarepttgaqlagmfenlr
interface signature	TQASR/TQASR

Estimated binding specificities ?

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# IC=11.401 IC/col=0.877 n_of_columns=13

specificity:

A |   6   0   0  78   0  78  24  24   6  96   0   0   6
C |   6   0  96   6   0   6  24  24   6   0   6   0  90
G |   6  96   0   6   0   6  24  24  78   0   6  96   0
T |  78   0   0   6  96   6  24  24   6   0  84   0   0

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updated Mon Sep 9 18:41:35 2024