| structure name | RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DCTP OPPOSITE 7,8- DIHYDRO-8-OXOGUANINE (DNA polymerase) |
| reference | Konigsberg et al. Biochemistry 49 4116 2010 |
| source | Enterobacteria phage RB69 |
| experiment | X-ray (resolution=2.05, R-factor=0.207) |
| structural superfamily | DNA/RNA polymerases;Ribonuclease H-like; |
| sequence family | DNA polymerase family B, exonuclease do; |
| redundant complexes | 2dtu 1q9y 2dy4 2p5g 2p5o 3cq8 3l8b 2ozs 2oyq 1q9x 3lds 3lzi 2ozm 1ig9 1clq 3cfr 3cfp |
| reference complex | 3qex_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--------------ET--------------------------------------------WA----KA--KG---- +-----------3lzj_A +----2 ----------------FTQT------------RTSG--------------IGNGAGYG--AA----KA--RGRCNA L ! ! +-----3k59_A +----------3 +-----1 IT--------------------------------QGQAVT--FTITSAQTIGNGSGYGFTVAKTLTKARGRC--NC L ! ! +-----3iay_A +-4 ! --PGKG--NTNTFC------YTRG------WG--------WG---------------------------------- ! ! +----------------2xhb_A --5 ! ------LC------------MG--RCFCEC---------------------------------------------- ! +---------------------------1kln_A ! --------NT--FT-------------------------------------------------------------- +----------------------------2py5_B |
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updated Thu Sep 12 17:37:47 2024