3mfk_AB : 3D-footprint complex

structure name	ETS1 COMPLEX WITH STROMELYSIN-1 PROMOTER DNA
reference	Babayeva et al. 'Cell 9 3054 2010
source	Homo sapiens
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4l18_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3mfk_A interface=87,90,93,94, gtfkdyvrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpda > 3mfk_B interface=87,90,93,94, gtfkdyvrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp
interface signature	KRRY/KRRY

Estimated binding specificities ?

readout + contact

# IC=8.981 IC/col=0.691 n_of_columns=13

specificity:

A |  73   0   0  89  66  14  24  24  24  24   1   0   0
C |   7   0   0   7  16   0  24  24  24  24   0  96  96
G |   7  96  96   0   7  66  24  24  24  24   7   0   0
T |   9   0   0   0   7  16  24  24  24  24  88   0   0

scan!

home
updated Mon Sep 9 18:58:43 2024