3mlo_AB : 3D-footprint complex

structure name	DNA BINDING DOMAIN OF EARLY B-CELL FACTOR 1 (EBF1) BOUND TO DNA (CRYSTAL FORM I)
reference	Grosschedl et al. 'Genes 24 2270 2010
source	Mus musculus
experiment	X-ray (resolution=3.01, R-factor=?)
reference complex	3mln_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3mlo_A interface=29,31,32,129,138,168,170,202,203,204,205, gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgenlyf > 3mlo_B interface=29,31,32,129,138,168,170,202,203,204,205, gvldantaaqsgvglarahfekqppsnlRkSNffhfvlalydrqgqpveiertafvgfvekekeansektnngihyrlqllysngirteqdfyvrlidsmtkqaivyegqdknpemcrvlltheimcsRccdkkscgNrnetpsdpviidrfflkfflkcnqnclknAgNprdmrrfqvvvsttvnvdghvlavsdnmfvhNNSKhgenlyfq
interface signature	RSNRNANNNSK/RSNRNANNNSK

Estimated binding specificities ?

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# IC=14.324 IC/col=0.955 n_of_columns=15

specificity:

A |  10   4  24   0   8   0   0   0  96   0   0   8   0  62  83
C |  12   4  24   0  12  96  96  96   0   0   0   1   0  14   5
G |  12   9  24   0  10   0   0   0   0   0  96  87  96  12   4
T |  62  79  24  96  66   0   0   0   0  96   0   0   0   8   4

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updated Mon Jan 5 05:41:36 2026