3mxb_AB : 3D-footprint complex

structure name	MOLECULAR BASIS OF ENGINEERED MEGANUCLEASE TARGETING OF THE ENDOGENOUS HUMAN RAG1 LOCUS
reference	Subramanian et al. 'Nucleic 39 729 2011
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	2vbo_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3mxb_A interface=21,23,25,27,29,31,37,39,43,45,65,67,72,74,138,139, ntkynkkfllylagfvdgdgSiIaQiNpNqSskfkhRlRltfYvTqktqrrwfldklvdeigvgYvRdsgsVsQyvlseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds > 3mxb_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,76,78,138,139, ntkyneefllylagfvdsdgSiIaQiKpRqSNkfkhQlSltfAvTqktqrrwfldklvdeigvgyvYdSgsVsDyRlSeikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravlds
interface signature	SIQNNSRRYTYRVQKT/SIQKRSNQSATYSVDRSKT

Estimated binding specificities ?

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# IC=23.159 IC/col=1.007 n_of_columns=23

specificity:

A |   0   0   4  24   0   0   0  75   4   9  77  94   4   2   0   0  96   2   0   0  96  24  96
C |   0   0   6  24  93   0  96   0  11   5   4   0  82  80   0  96   0   2  96  96   0  24   0
G |   0  96   4  24   3   0   0   1  77  73   4   2   4   8   0   0   0  88   0   0   0  24   0
T |  96   0  82  24   0  96   0  20   4   9  11   0   6   6  96   0   0   4   0   0   0  24   0

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updated Mon Jan 5 05:46:13 2026