3o9x_AB : 3D-footprint complex

structure name	STRUCTURE OF THE E. COLI ANTITOXIN MQSA (YGIT/B3021) IN COMPLEX WITH ITS GENE PROMOTER
reference	Brown et al. J.Biol.Chem. 286 2285 2011
source	Escherichia coli
experiment	X-ray (resolution=2.10, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3o9x_A interface=86,97,98,101,102, hmkcpvchqgemvsgikdipytfrgrktvlkgihglycvhceesimnkeesdafmaqvkafrasvnaetvapefivkvrkklsltQkeaseifgggVNafSRyekgnaqphpstikllrvldkhpellneir > 3o9x_B interface=97,98,101,102, hmkcpvchqgemvsgikdipytfrgrktvlkgihglycvhceesimnkeesdafmaqvkafrasvnaetvapefivkvrkklsltqkeaseifgggVNafSRyekgnaqphpstikllrvldkhpellneir
interface signature	QVNSR/VNSR

Estimated binding specificities ?

readout + contact

# IC=9.984 IC/col=0.666 n_of_columns=15

specificity:

A |   1  81  96   0   0  24  24  24  24  24   0   0   0  29  66
C |   7  14   0  96  96  24  24  24  24  24   0   1   0   7  16
G |   0   0   0   0   0  24  24  24  24  24  96  29   0   9   7
T |  88   1   0   0   0  24  24  24  24  24   0  66  96  51   7

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updated Fri Dec 13 16:46:31 2024