interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF OKRAI/DNA COMPLEX
referenceAggarwal et al. 'Nucleic 39 712 2011
sourceOceanobacter kriegii
experimentX-ray (resolution=2.30, R-factor=?)
structural superfamilyRestriction endonuclease-like;
reference complex3odh_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRYTDRVDR/NSRRYTDRE

Estimated binding specificities ?

contactlogo
# IC=9.904 IC/col=1.238 n_of_columns=8 specificity:   
A |   0   0   0  96   4   0   0  92
C |   0   0   0   0   4  96  96   1
G |   0  96  96   0   7   0   0   2
T |  96   0   0   0  81   0   0   1
scan!

home
updated Wed Jun 24 17:42:21 2026