3ool_A : 3D-footprint complex

structure name	I-SCEI COMPLEXED WITH C/G+4 DNA SUBSTRATE (Intron encoded endonuclease I-SceI)
reference	Golden et al. J.Mol.Biol. 405 185 2011
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.30, R-factor=0.250)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG DNA endonuclease family;
reference complex	1r7m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3ool_A interface=12,13,44,46,48,57,59,84,86,88,94,96,100,148,149,150,161,163,190,191, nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlspphkKeRvNhlgnlViTwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkwDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp
interface signature	PNYRRQEKRNVTQDYNNQNK

Estimated binding specificities ?

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# IC=18.723 IC/col=0.985 n_of_columns=19

specificity:

A |   4   0  84  74   4   0  87  24  24  96   0   0   0   0   0   1  82  78   1
C |  78   0   4   4   0   0   0  24  24   0  96  96   0   0   0  91   4  10   4
G |   6   0   4  14  91  96   0  24  24   0   0   0  96  96  96   0   6   4   0
T |   8  96   4   4   1   0   9  24  24   0   0   0   0   0   0   4   4   4  91

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updated Thu Sep 12 17:49:31 2024