3ool_A : 3D-footprint complex

structure name	I-SCEI COMPLEXED WITH C/G+4 DNA SUBSTRATE (Intron encoded endonuclease I-SceI)
reference	Golden et al. J.Mol.Biol. 405 185 2011
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.30, R-factor=0.250)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG DNA endonuclease family;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3ool_A interface=12,13,44,46,48,57,59,84,86,88,94,96,100,148,149,150,161,163,190,191, nikknqvmnlgPNskllkeyksqlielnieqfeagiglilgdaYiRsRdegktycmQfEwknkaymdhvcllydqwvlspphkKeRvNhlgnlViTwgaQtfkhqafnklanlfivnnkktipnnlvenyltpmslaywfmddggkwDYNknstnksivlNtQsftfeeveylvkglrnkfqlncyvkiNKnkpiiyidsmsylifynlikpylipqmmyklp
interface signature	PNYRRQEKRNVTQDYNNQNK

Estimated binding specificities ?

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# IC=18.926 IC/col=0.996 n_of_columns=19

specificity:

A |  92   4   0   4   0   0   0   0   0   0  24  24   8   0   0   4   0  96   8
C |   0   4   5   0  96  96  96   0   0   0  24  24   8  96  91  20   4   0   4
G |   4   9   0  92   0   0   0  96  96   0  24  24   5   0   0   0   5   0  76
T |   0  79  91   0   0   0   0   0   0  96  24  24  75   0   5  72  87   0   8

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updated Mon Dec 16 21:37:50 2024