interface graph thumbnail
legend  pdf

structure nameTHE STRUCTURE OF PROTOZOAN PARASITE TRICHOMONAS VAGINALIS MYB2 IN COMPLEX WITH MRE-2F-13 DNA
(MYB21)
referenceAmiraslanov et al. 'Nucleic 39 8992 2011
sourceTRICHOMONAS VAGINALIS
experimentX-ray (resolution=2.03, R-factor=0.209)
structural superfamilyHomeodomain-like;
sequence familyMyblike DNAbinding domain;
reference complex3osg_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKKRRDYDIKNVT

Estimated binding specificities ?

readout + contactlogo
# IC=7.140 IC/col=0.892 n_of_columns=8 specificity:   
A |  57  24  54   0   0  96   0  96
C |  13  24  13  96   0   0   0   0
G |  13  24  16   0  96   0   0   0
T |  13  24  13   0   0   0  96   0
scan!

home
updated Thu Jan 8 22:29:47 2026