interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MANGANESE AT 2.55 RESOLUTION
(PFV integrase)
referenceCherepanov et al.
sourceHuman spumaretrovirus
experimentX-ray (resolution=2.55, R-factor=0.199)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
redundant complexes3oya 3l2u 3l2q 3l2w 3l2v 3l2r
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

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# IC=2.203 IC/col=0.551 n_of_columns=4 specificity:   
A |   3   7   9  45
C |   3   4  67  19
G |  85   4   9  16
T |   5  81  11  16
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updated Thu Sep 12 17:50:33 2024