interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI L-870,810
(PFV INTEGRASE)
referenceCherepanov et al. Proc.Natl.Acad.Sci.USA 107 20057 2010
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.51, R-factor=0.206)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

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# IC=2.389 IC/col=0.597 n_of_columns=4 specificity:   
A |  17   8  78   2
C |  15   8   6  90
G |  15  70   6   2
T |  49  10   6   2
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updated Thu Sep 12 17:51:32 2024