interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PFV S217H MUTANT INTASOME BOUND TO MANGANESE
(PFV integrase)
referenceCherepanov et al. Proc.Natl.Acad.Sci.USA 107 20057 2010
sourceHuman spumaretrovirus
experimentX-ray (resolution=2.72, R-factor=0.203)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

contactlogo
# IC=1.900 IC/col=0.475 n_of_columns=4 specificity:   
A |   4   8   9  45
C |   4   7  67  19
G |  81   7   9  16
T |   7  74  11  16
scan!

home
updated Thu Sep 12 17:52:21 2024