interface graph thumbnail
legend  pdf

structure nameSTRUCTURAL BASIS OF SELECTIVE BINDING OF NONMETHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1
(CpG-binding protein)
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=1.90, R-factor=0.225)
sequence familyCXXC zinc finger domain;
redundant complexes3qmc_A 3qmg_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRQRY

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  13   0   0  16
C |  13  96   0  13
G |  16   0  96  13
T |  54   0   0  54
scan!

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updated Sat Jan 10 06:25:03 2026