interface graph thumbnail
legend  pdf

structure nameSTRUCTURAL BASIS OF SELECTIVE BINDING OF NON-METHYLATED CPG ISLANDS BY THE CXXC DOMAIN OF CFP1
(CpG-binding protein)
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.30, R-factor=0.219)
sequence familyCXXC zinc finger domain;
reference complex3qmd_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQRY

Estimated binding specificities ?

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# IC=3.350 IC/col=0.837 n_of_columns=4 specificity:   
A |  42   0   0   3
C |  18  96   1   3
G |  18   0  86  87
T |  18   0   9   3
scan!

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updated Thu Jan 8 22:44:09 2026