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legend  pdf

structure nameDNA BINDING DOMAIN OF RESTRICTION ENDONUCLEASE BOUND TO DNA
(5-methylcytosine-specific restriction enzyme B)
referenceSukackaite et al. 'Nucleic 40 7552 2012
sourceEscherichia coli
experimentX-ray (resolution=2.70, R-factor=0.223)
multimeric complexes3ssc_AB 3ssd_AB 3sse_AB 6gcd_AB 6gce_AB 6gcf_AB 8ijo_AB 8ijp_AB 8ik4_AB 8ik8_AB 8ikd_AB
reference complex6gcf_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQYNWAYSDTY

Estimated binding specificities ?

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# IC=4.188 IC/col=1.047 n_of_columns=4 specificity:   
A |  14   0   0   0
C |  52   0   0   0
G |  14  96  96   0
T |  16   0   0  96
scan!

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updated Sat Aug 2 05:09:57 2025