3sun_A : 3D-footprint complex

structure name	RB69 DNA POLYMERASE (Y567A) TERNARY COMPLEX WITH DTTP OPPOSITE 2AP (AT RICH SEQUENCE) (DNA polymerase)
reference	Konigsberg et al. Biochemistry 50 10136 2011
source	Enterobacteria phage RB69
experiment	X-ray (resolution=2.42, R-factor=0.208)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family B, exonuclease do;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3sun_A interface=706,734,800, mkefyltveqigdsiferyidsngrertreveykpslfahcpesqatkyfdiygkpctrklfanmrdasqwikrmediglealgmddfklaylsdtynyeikydhtkirvanfdievtspdgfpepsqakhpidaithydsiddrfyvfdllnspygnveewsieiaaklqeqggdevpseiidkiiympfdnekellmeylnfwqqktpviltgwnvesfaipyvynriknifgestakrlsphrktrvkvienmygsreiitlfgisvldyidlykkfsftnqpsysldyisefelnvgklkydgpisklresnhqryisyniiavyrvlqidakrqfinlsldmgyyakiqiqsvfspiktwdaiifnslkeqnkvipqgrshpvqpypgafvkepipnrykyvmsfdltslypsiirqvnispetiagtfkvaplhdyinavaerpsdvyscspngmmyykdrdgvvpteitkvfnqrkehkgymlaaqrngeiikealhnpnlsvdepldvdyrfdfsdeikekikklsakslnemlfraqrtevagmtaqinrkllinslagalgnvwfryydlrnataittfgqmalqwierkvneylnevcgtegeafvlygdtdsiyvsadkiidkvgeskfrdtnhwvdfldkfarermepaidrgfremceymnnkqhlmfmdreaiagpplgskgiggfwtgkKryalnvwdmegtryaepklkimgletqKsstpkavqkalkecirrmlqegeeslqeyfkefekefrqlnyisiasvssanniakydvggfpgpKcpfhirgiltynraikgnidapqvvegekvyvlplregnpfgdkciawpsgteitdlikddvlhwmdytvllektfikplegftsaakldyekka
interface signature	KKK

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# IC=3.494 IC/col=0.437 n_of_columns=8

A |  84  60   6  24  24  24   0   6
C |   6  12  12  24  24  24   0   6
G |   6  12  24  24  24  24   0   6
T |   0  12  54  24  24  24  96  78

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updated Mon Dec 16 22:10:52 2024