3u3w_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF BACILLUS THURINGIENSIS PLCR IN COMPLEX WITH THE PEPTIDE PAPR7 AND DNA
reference	Bouillaut et al. Proc.Natl.Acad.Sci.USA 110 1047 2013
source	Bacillus thuringiensis
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;TPR-like;
reference complex	3u3w_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3u3w_A interface=28,29,30,31,33,34,40, aeklgseikkirvlrgltqkqlsenicHQSEvSRiesgaVypsmdilqgiaaklqipiihfyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyvaayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqilkqlealhdneefdvkvrynhakalyldsryeeslyqvnkaieiscrinsmaligqlyyqrgeclrkleyeeaeiedaykkasfffdilemhaykealvnk > 3u3w_B interface=28,29,30,31,33,34,40, aeklgseikkirvlrgltqkqlsenicHQSEvSRiesgaVypsmdilqgiaaklqipiihfyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyvaayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqilkqlealhdneefdvkvrynhakalyldsryeeslyqvnkaieiscrinsmaligqlyyqrgeclrkleyeeaeiedaykkasfffdilemhaykealvnk
interface signature	HQSESRV/HQSESRV

Estimated binding specificities ?

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# IC=13.087 IC/col=0.818 n_of_columns=16

specificity:

A |   8  96   0   0   0  96  24  24  24  24   0   0   0  96   8  64
C |   8   0   0   0  96   0  24  24  24  24   0   0  96   0  56   8
G |  16   0   0  96   0   0  24  24  24  24   0   0   0   0   8  16
T |  64   0  96   0   0   0  24  24  24  24  96  96   0   0  24   8

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updated Fri Dec 13 17:33:34 2024