3u3w_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF BACILLUS THURINGIENSIS PLCR IN COMPLEX WITH THE PEPTIDE PAPR7 AND DNA
reference	Bouillaut et al. Proc.Natl.Acad.Sci.USA 110 1047 2013
source	Bacillus thuringiensis
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;TPR-like;
reference complex	3u3w_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3u3w_A interface=28,29,30,31,33,34,40, aeklgseikkirvlrgltqkqlsenicHQSEvSRiesgaVypsmdilqgiaaklqipiihfyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyvaayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqilkqlealhdneefdvkvrynhakalyldsryeeslyqvnkaieiscrinsmaligqlyyqrgeclrkleyeeaeiedaykkasfffdilemhaykealvnk > 3u3w_B interface=28,29,30,31,33,34,40, aeklgseikkirvlrgltqkqlsenicHQSEvSRiesgaVypsmdilqgiaaklqipiihfyevliysdierkkqfkdqvimlckqkrykeiynkvwnelkkeeyhpefqqflqwqyyvaayvlkkvdyeycilelkkllnqqltgidvyqnlyienaianiyaengylkkgidlfeqilkqlealhdneefdvkvrynhakalyldsryeeslyqvnkaieiscrinsmaligqlyyqrgeclrkleyeeaeiedaykkasfffdilemhaykealvnk
interface signature	HQSESRV/HQSESRV

Estimated binding specificities ?

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# IC=13.111 IC/col=0.819 n_of_columns=16

specificity:

A |  19  19   0   0  96  96  24  24  24  24   0   0   0  96   0  57
C |  10  11   0   0   0   0  24  24  24  24   0   0  96   0   0  19
G |   0  57   0  96   0   0  24  24  24  24   0  96   0   0   0   9
T |  67   9  96   0   0   0  24  24  24  24  96   0   0   0  96  11

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updated Mon Sep 9 20:05:25 2024