3v79_C : 3D-footprint complex

structure name	STRUCTURE OF HUMAN NOTCH1 TRANSCRIPTION COMPLEX INCLUDING CSL, RAM, ANK, AND MAML-1 ON HES-1 PROMOTER DNA SEQUENCE (RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS)
reference	Blacklow et al. Structure 20 340 2012
source	HOMO SAPIENS
experiment	X-ray (resolution=3.85, R-factor=0.213)
structural superfamily	p53-like transcription factors;DNA-binding protein LAG-1 CSL;E set domains;
sequence family	Betatrefoil; LAG1, DNA binding; IPT/TIG domain;
multimeric complexes	3nbn_AD
reference complex	3iag_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3v79_C interface=36,39,41,141,142,171,172, rpppkrltreamrnylkergdqtvlilhakvaqksYgnEkRffcpppcvylmgsgwkkkkeqmerdgcseqesqpcafigignsdqemqqlnlegknyctaktlyisdsdkrkhfmlsvkmfygnsddigvflskrikviSKpskkkqslknadlciasgtkvalfnrlrSQtvstrylhveggnfhassqqwgaffihlldddesegeeftvrdgyihygqtvklvcsvtgmalprliirkvdkqtalldaddpvsqlhkcafylkdtermylclsqeriiqfqatpcpkepnkemindgaswtiistdkaeytfyegmgpvlapvtpvpvveslqlngggdvamleltgqnftpnlrvwfgdveaetmyrcgesmlcvvpdisafregwrwvrqpvqvpvtlvrndgiiystsltftytpep
interface signature	YERSKSQ

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# IC=7.016 IC/col=0.877 n_of_columns=8

A |   4   0   4   4   4  84   4  82
C |   6   0  84  82  82   4  82   6
G |   4   0   4   4   6   4   4   4
T |  82  96   4   6   4   4   6   4

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updated Mon Dec 16 22:25:48 2024