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structure nameCRYSTAL STRUCTURE OF DNA-GLYCOSYLASE BOUND TO DNA CONTAINING 5- HYDROXYURACIL
(Probable formamidopyrimidine-DNA glycosylase)
referenceWallace et al.
sourceAcanthamoeba polyphaga mimivirus
experimentX-ray (resolution=2.10, R-factor=0.218)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2;
reference complex3vk8_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLMRFSKNR

Estimated binding specificities ?

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# IC=6.633 IC/col=0.948 n_of_columns=7 specificity:   
A |  96   0   0   9   0  67   9
C |   0   0   0  67   0   9  67
G |   0  96   0   9   0  11   9
T |   0   0  96  11  96   9  11
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updated Sat Aug 2 05:26:38 2025