3zkc_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE MASTER REGULATOR FOR BIOFILM FORMATION SINR IN COMPLEX WITH DNA.
reference	Rodrigues et al. J.Biol.Chem. 288 10766 2013
source	BACILLUS SUBTILIS
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3zkc_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3zkc_A interface=17,26,27,28,29,31,35,38, igqrikqyrkekgyslSelaekagvAKSYlSsieRnlQtnpsiqflekvsavldvsvhtll > 3zkc_B interface=18,27,28,29,30,32,36,39, migqrikqyrkekgyslSelaekagvAKSYlSsieRnlQtnpsiqflekvsavldvsvhtlld
interface signature	SAKSYSRQ/SAKSYSRQ

Estimated binding specificities ?

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# IC=9.529 IC/col=0.635 n_of_columns=15

specificity:

A |   0   0   0   0  10  24  24  24  24   2  24   0  85  60  16
C |   0   0   0  96  18  24  24  24  24  10  24   0   5  10  75
G |  96   0   0   0  10  24  24  24  24  74  24  96   0  10   5
T |   0  96  96   0  58  24  24  24  24  10  24   0   6  16   0

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updated Mon Jan 5 08:16:43 2026