3zkc_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE MASTER REGULATOR FOR BIOFILM FORMATION SINR IN COMPLEX WITH DNA.
reference	Rodrigues et al. J.Biol.Chem. 288 10766 2013
source	BACILLUS SUBTILIS
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3zkc_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3zkc_A interface=17,26,27,28,29,31,35,38, igqrikqyrkekgyslSelaekagvAKSYlSsieRnlQtnpsiqflekvsavldvsvhtll > 3zkc_B interface=18,27,28,29,30,32,36,39, migqrikqyrkekgyslSelaekagvAKSYlSsieRnlQtnpsiqflekvsavldvsvhtlld
interface signature	SAKSYSRQ/SAKSYSRQ

Estimated binding specificities ?

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# IC=9.472 IC/col=0.631 n_of_columns=15

specificity:

A |   4   9   6   0  24   9  24  24  24  24  57   0  96  96   0
C |   6  16   0  96  24  76  24  24  24  24  16   0   0   0  96
G |  72   9   4   0  24   9  24  24  24  24   9  96   0   0   0
T |  14  62  86   0  24   2  24  24  24  24  14   0   0   0   0

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updated Wed Jun 24 19:58:40 2026