interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM STAPHYLOCOCCUS AUREUS IN COMPLEX WITH DNA OPERATOR
(TRANSCRIPTION FACTOR FAPR)
referenceBuschiazzo et al. 'Plos 9 3108 2013
sourceSTAPHYLOCOCCUS AUREUS
experimentX-ray (resolution=3.15, R-factor=0.187)
structural superfamilyThioesterase/thiol ester dehydrase-isomerase;"Winged helix" DNA-binding domain;
multimeric complexes4a12_ABCD
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSQTRLR

Estimated binding specificities ?

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# IC=4.915 IC/col=0.614 n_of_columns=8 specificity:   
A |  96   7  24   7  24   7   0  73
C |   0   7  24   7  24  73   0   7
G |   0  73  24   9  24   7   0   9
T |   0   9  24  73  24   9  96   7
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updated Mon Jun 29 17:33:46 2026