4aag_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET IN PRESENCE OF CA AT THE ACTIVE SITE (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3')
reference	Marenchino et al. 'Nucleic 40 6936 2012
source	CHLAMYDOMONAS REINHARDTII
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4aag_A interface=21,23,25,27,29,31,32,37,43,45,67,69,71,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgSVsNyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 4aag_B interface=21,23,25,27,29,31,32,37,43,45,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiKpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgyvRdRgsVsnyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQKNSYQQTRRSVNKT/SIQKNSYQQTRRVKT

Estimated binding specificities ?

readout + contact

# IC=23.979 IC/col=1.090 n_of_columns=22

specificity:

A |   0  94  96   8  96   3   7   0   0   3   1  63   6   0  96   1   0   1   0  19   0   0
C |  93   0   0   3   0  11   7   0  96   1   1   6  80   0   0  86   0   0   0  11   0   0
G |   0   2   0   3   0  81  78   0   0  92   4   3   5  96   0   6  96   7   0   1   0  96
T |   3   0   0  82   0   1   4  96   0   0  90  24   5   0   0   3   0  88  96  65  96   0

scan!

home
updated Fri Dec 13 19:05:12 2024