4aso_EFG : 3D-footprint complex

structure name	TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS
reference	Aylett et al. Proc.Natl.Acad.Sci.USA 109 16522 2012
source	BACILLUS THURINGIENSIS
experiment	X-ray (resolution=7.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4aso_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4aso_E interface=48,49,50,53, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka > 4aso_F interface=48,49,50,51,53,72, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka > 4aso_G interface=48,49,50, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka
interface signature	SKPF/SKPTFR/SKP

Estimated binding specificities ?

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# IC=8.322 IC/col=0.640 n_of_columns=13

specificity:

A |   0   0   0  96  96  11  24  24  24  24  63  11   7
C |   0   0   0   0   0  56  24  24  24  24  11  12   5
G |   0   0   0   0   0  13  24  24  24  24  11  62   5
T |  96  96  96   0   0  16  24  24  24  24  11  11  79

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updated Mon Sep 9 21:31:36 2024