interface graph thumbnail
legend  pdf

structure nameTUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS
(TUBR FROM BACILLUS THURINGIENSIS PBTOXIS)
referenceAylett et al. Proc.Natl.Acad.Sci.USA 109 16522 2012
sourceBACILLUS THURINGIENSIS
experimentX-ray (resolution=7.00, R-factor=0.346)
structural superfamily"Winged helix" DNA-binding domain;
multimeric complexes4aso_ABC 4aso_EFG 4aso_HL 4aso_IJK 4aso_MNOP 4ass_EFGHI
redundant complexes4ass_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSKPTFR

Estimated binding specificities ?

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# IC=3.527 IC/col=0.882 n_of_columns=4 specificity:   
A |   0  19  96  96
C |  19  19   0   0
G |   1  19   0   0
T |  76  39   0   0
scan!

Dendrogram of similar interfaces ?

matrix format
  
  ------STSTQAQGSTSART----------KT--   L                 +---------------------5trd_B    
                                                 +-------1 
  --------ST----TC--QG----RG--------           +-2       +---------------------7b24_C    
                                               ! ! 
  ----------------NASTRGHT--STLT--KA   L     +-3 +-----------------------------2c6y_A    
                                             ! ! 
  --------ITRGECSCSGKG--------------   L   +-4 +-----------------------------5i2d_R    
                                           ! ! 
  HAKARA----------------------------     --5 +-----------------------------6dta_A    
                                           ! 
  --------DCLT--AGTTRG----RG------RA   L   +-----------------------------5h3r_A    
                                         

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updated Fri Sep 13 18:03:03 2024