4aso_IJK : 3D-footprint complex

structure name	TUBR BOUND TO 24 BP OF TUBC FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS
reference	Aylett et al. Proc.Natl.Acad.Sci.USA 109 16522 2012
source	BACILLUS THURINGIENSIS
experiment	X-ray (resolution=7.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4aso_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4aso_I interface=48,49,50,51,53, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka > 4aso_J interface=48,49,50,51, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPTvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka > 4aso_K interface=39,48,49,50,51,53, fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPTvFatvnsfycagyidetrvgrskiytlsdlgveivecfkqka
interface signature	SKPTF/SKPT/TSKPTF

Estimated binding specificities ?

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# IC=5.066 IC/col=0.317 n_of_columns=16

specificity:

A |  52  56  85   6  22  24  24  24  24  19  12   6  52  72  81   8
C |  16  14   3  78  20  24  24  24  24  20  12   6  14   8   4  70
G |  14  13   3   6  20  24  24  24  24  38  12   6  16   8   4  10
T |  14  13   5   6  34  24  24  24  24  19  60  78  14   8   7   8

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updated Mon Sep 9 21:31:48 2024