4ass_EFGHI : 3D-footprint complex

structure name	TUBR BOUND TO TUBC - 26 BP - FROM BACILLUS THURINGIENSIS SEROVAR ISRAELENSIS PBTOXIS
reference	Aylett et al. Proc.Natl.Acad.Sci.USA 109 16522 2012
source	BACILLUS THURINGIENSIS
experiment	X-ray (resolution=7.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4aso_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ass_E interface=49,50, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlsKPtvfatvnsfycagyidetrvgrskiytlsdlgveivecfkqka > 4ass_F interface=48,49,50,53,72, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlSKPtvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka > 4ass_G interface=39,48,49,50,53,72, fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPtvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka > 4ass_H interface=39,48,49,50,51,53,72, fytlniaeiaerignddcayqvlmafinengeaqmlnkTavaemiqlSKPTvFatvnsfycagyidetrvgRskiytlsdlgveivecfkqka > 4ass_I interface=49,72, fytlniaeiaerignddcayqvlmafinengeaqmlnktavaemiqlsKptvfatvnsfycagyidetrvgRskiytlsdlgveivecfkqka
interface signature	KP/SKPFR/TSKPFR/TSKPTFR/KR

Estimated binding specificities ?

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# IC=21.125 IC/col=0.960 n_of_columns=22

specificity:

A |  69  96  96   0   0  13  96  96  96   0   0  24  24  24  82   0   0   8  69  96  96   0
C |   8   0   0  96   0  13   0   0   0   0   0  24  24  24   4  96   0   8   8   0   0   0
G |   8   0   0   0   0  56   0   0   0  96   0  24  24  24   4   0   0  11  11   0   0  96
T |  11   0   0   0  96  14   0   0   0   0  96  24  24  24   6   0  96  69   8   0   0   0

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updated Mon Sep 9 21:32:20 2024