4ati_AB : 3D-footprint complex

structure name	MITF:M-BOX COMPLEX
reference	Pogenberg et al. 'Genes 26 2647 2012
source	MUS MUSCULUS
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	HLH, helix-loop-helix DNA-binding domain;
reference complex	6g1l_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ati_A interface=1,2,4,5,8,9, HNlIErrRRfnindrikelgtlipksmrwnkgtilkasvdyirklqreqqrakdlen > 4ati_B interface=7,8,10,11,14,15, rqkkdnHNlIErrRRfnindrikelgtlipksdpdmrwnkgtilkasvdyirklqreqqrakdlenrqkkl
interface signature	HNIERR/HNIERR

Estimated binding specificities ?

readout + contact

# IC=9.337 IC/col=1.037 n_of_columns=9

specificity:

A |  96   9   0  96   9  96   9   0  96
C |   0   9  96   0  67   0  11   0   0
G |   0  69   0   0  11   0   9  96   0
T |   0   9   0   0   9   0  67   0   0

scan!

home
updated Mon Sep 9 21:32:40 2024