4auw_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE
reference	Textor et al. 'Acta 63 657 2007
source	MUS MUSCULUS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;
reference complex	2wt7_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4auw_A interface=33,37,40,41,44,45,48, sddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykRvqqkhhlenektqliqqveqlkqevsrlarerdaykvks > 4auw_B interface=32,36,39,40,43,44, ddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvk
interface signature	RNYACRR/RNYACR

Estimated binding specificities ?

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# IC=15.057 IC/col=0.886 n_of_columns=17

specificity:

A |   0  90  24   0   0   5  11  24  96   0   0   0  24  56   0   0  84
C |   0   0  24   0   0  73  18  24   0  96   0   0  24  11   0  96   5
G |   0   5  24   0  96   7  11  24   0   0  96   0  24  13  96   0   7
T |  96   1  24  96   0  11  56  24   0   0   0  96  24  16   0   0   0

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updated Mon Sep 9 21:32:57 2024