4auw_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE
reference	Textor et al. 'Acta 63 657 2007
source	MUS MUSCULUS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;
reference complex	2wt7_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4auw_E interface=35,39,42,43,46,47, mfsddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkse > 4auw_F interface=35,39,42,43,46,47, mfsddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvks
interface signature	RNYACR/RNYACR

Estimated binding specificities ?

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# IC=12.346 IC/col=0.882 n_of_columns=14

specificity:

A |   4   0   4  24  84  96   0   0  24   4   4   6   0  82
C |   4   0  82  24   4   0  96   0  24   6   4   4  96   4
G |   4  96   6  24   4   0   0  96  24   4   6  82   0   4
T |  84   0   4  24   4   0   0   0  24  82  82   4   0   6

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updated Mon Sep 9 21:33:09 2024