interface graph thumbnail
legend  pdf

structure namePFV INTASOME WITH INHIBITOR XZ-259
(PFV INTEGRASE)
referenceCherepanov et al. 'Acs 8 209 2013
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.38, R-factor=0.196)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

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# IC=2.665 IC/col=0.666 n_of_columns=4 specificity:   
A |  16   8  78   0
C |  19   8   6  96
G |  16  72   6   0
T |  45   8   6   0
scan!

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updated Thu Jan 8 23:55:02 2026