4chu_AB : 3D-footprint complex

structure name	E. COLI ISCR-DNA COMPLEX
reference	Macedo-Ribeiro et al. Proc.Natl.Acad.Sci.USA 111 E2251 2014
source	ESCHERICHIA COLI K-12
experiment	X-ray (resolution=2.49, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4hf1_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4chu_A interface=39,41,42,44,45,60,62, mgrltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdesvdkslthalwrdlsdrltgflnnitlgelvnnqevldvs > 4chu_B interface=38,40,41,43,44,59,61, grltskgryavtamldvalnseagpvpladiserqgiSlSYlEQlfsrlrknglvssvRgPgggyllgkdassiavgevisavdqgkggsqggdkslthalwrdlsdrltgflnnitlgelvnnqev
interface signature	SSYEQRP/SSYEQRP

Estimated binding specificities ?

readout + contact

# IC=12.262 IC/col=0.645 n_of_columns=19

specificity:

A |   0   0   0  24   0  96   6  24  24  24  24  24  12   0  84  24   0   0  12
C |   6  96  96  24  90   0  60  24  24  24  24  24  12   0   0  24   0   0   6
G |   0   0   0  24   0   0  12  24  24  24  24  24  60   0  12  24   0  96  12
T |  90   0   0  24   6   0  18  24  24  24  24  24  12  96   0  24  96   0  66

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updated Wed Jul 30 00:53:33 2025