4cn2_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN RAMP2 RESPONSE ELEMENT
reference	Poussin-Courmontagne et al. Sci.Rep. 5 8216 2015
source	HOMO SAPIENS
experiment	X-ray (resolution=2.07, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4cn2_C interface=25,28,32,33,81, mftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRq > 4cn2_D interface=22,25,29,30,78, khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRqrg
interface signature	EKKRR/EKKRR

Estimated binding specificities ?

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# IC=11.625 IC/col=0.894 n_of_columns=13

specificity:

A |  66   0   0  14   0  81  24   7   0   0   0   0  81
C |   7   0   0   9  96   3  24   5   0   0   3  96   7
G |  14  96  70  11   0   3  24  77  96  96   0   0   3
T |   9   0  26  62   0   9  24   7   0   0  93   0   5

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updated Wed Jul 30 00:54:01 2025