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structure nameCRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN GDE1SPA RESPONSE ELEMENT
referencePoussin-Courmontagne et al. Sci.Rep. 5 8216 2015
sourceHOMO SAPIENS
experimentX-ray (resolution=2.35, R-factor=?)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
reference complex6fbq_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKKR/EKKRR

Estimated binding specificities ?

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# IC=11.652 IC/col=0.971 n_of_columns=12 specificity:   
A |   0   0   0   0  64  24  16   0   0   0   0  72
C |   0   0   8  96  16  24   0   0   0   8  96   0
G |  96   0   0   0   8  24  64  96   0   0   0   8
T |   0  96  88   0   8  24  16   0  96  88   0  16
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updated Wed Jul 30 00:54:09 2025