4cn3_BC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN GDE1SPA RESPONSE ELEMENT
reference	Poussin-Courmontagne et al. Sci.Rep. 5 8216 2015
source	HOMO SAPIENS
experiment	X-ray (resolution=2.35, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4cn3_B interface=21,24,28,29, hicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqee > 4cn3_C interface=28,31,35,36,84, gshmftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeR
interface signature	EKKR/EKKRR

Estimated binding specificities ?

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# IC=10.625 IC/col=0.885 n_of_columns=12

specificity:

A |   0   0   9   0  68  24  18   0   0   6   0  82
C |   0   0   9  96   9  24   1   0   0   4  96   4
G |  96   0  14   0   9  24  73  96  78   4   0   6
T |   0  96  64   0  10  24   4   0  18  82   0   4

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updated Wed Jun 24 20:32:39 2026