4cn5_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN NR1D1 RESPONSE ELEMENT
reference	Poussin-Courmontagne et al. Sci.Rep. 5 8216 2015
source	HOMO SAPIENS
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4cn5_A interface=25,28,32,33,81, mftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeR > 4cn5_B interface=12,22,25,29,30,75, khicaicgdrsSgkhygvyscEgcKgffKRtvrkdltytckdclidkrqrnrcqycryqkclamgmkreavqeeR
interface signature	EKKRR/SEKKRR

Estimated binding specificities ?

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# IC=12.692 IC/col=0.976 n_of_columns=13

specificity:

A |   5   0  96  96   0  11  24   7   0  73   0   0   5
C |   2   0   0   0  96  18  24   5   0  11  96  96  81
G |   5  96   0   0   0   5  24   5  96  12   0   0   5
T |  84   0   0   0   0  62  24  79   0   0   0   0   5

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updated Wed Jul 30 00:54:22 2025