4cn7_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO AN IDEALIZED DR1 RESPONSE ELEMENT
reference	Poussin-Courmontagne et al. Sci.Rep. 5 8216 2015
source	HOMO SAPIENS
experiment	X-ray (resolution=2.34, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4cn7_A interface=28,31,35,36, gshmftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkrea > 4cn7_B interface=22,25,29,30, khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerq
interface signature	EKKR/EKKR

Estimated binding specificities ?

readout + contact

# IC=11.484 IC/col=0.883 n_of_columns=13

specificity:

A |   0   0  76   0   0  24  24   6   0  83   0   0  19
C |   0   0  12  96  96  24  24   6   0   1  96  96   6
G |  12  96   8   0   0  24  24   8  96   6   0   0  12
T |  84   0   0   0   0  24  24  76   0   6   0   0  59

scan!

home
updated Wed Jul 30 00:54:30 2025