4cn7_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO AN IDEALIZED DR1 RESPONSE ELEMENT
reference	Poussin-Courmontagne et al. Sci.Rep. 5 8216 2015
source	HOMO SAPIENS
experiment	X-ray (resolution=2.34, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4cn7_A interface=28,31,35,36, gshmftkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkrea > 4cn7_B interface=22,25,29,30, khicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeerq
interface signature	EKKR/EKKR

Estimated binding specificities ?

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# IC=10.335 IC/col=0.861 n_of_columns=12

specificity:

A |   0   0   7   0  75  24  24   0   0   7   0  73
C |   0   0   7  96   7  24  24   0   0   7  96   7
G |  96  96   7   0   7  24  24  96  96   9   0   7
T |   0   0  75   0   7  24  24   0   0  73   0   9

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updated Mon Sep 9 21:47:02 2024