4cn7_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO AN IDEALIZED DR1 RESPONSE ELEMENT
reference	Poussin-Courmontagne et al. Sci.Rep. 5 8216 2015
source	HOMO SAPIENS
experiment	X-ray (resolution=2.34, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	6fbq_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4cn7_E interface=23,26,30,31, tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqe > 4cn7_F interface=23,26,30,31,79, tkhicaicgdrssgkhygvyscEgcKgffKRtvrkdltytcrdnkdclidkrqrnrcqycryqkclamgmkreavqeeRq
interface signature	EKKR/EKKRR

Estimated binding specificities ?

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# IC=11.669 IC/col=0.972 n_of_columns=12

specificity:

A |   0   0   0   0  78  10  30   0   0   8   0  78
C |   0   0  10  96   6  15   6   0   0   6  96   6
G |  96  96   0   0   6  10  57  96  96  10   0   6
T |   0   0  86   0   6  61   3   0   0  72   0   6

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updated Wed Jul 30 00:54:41 2025