interface graph thumbnail
legend  pdf

structure namePFV INTASOME FREEZE-TRAPPED PRIOR TO 3'-PROCESSING, MN-BOUND FORM (UI- MN)
(PRO-POL POLYPROTEIN)
referenceCherepanov et al. 'Embo 31 3020 2012
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.53, R-factor=0.184)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERSP

Estimated binding specificities ?

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# IC=2.299 IC/col=0.575 n_of_columns=4 specificity:   
A |   2   8   9  48
C |   1   7  67  16
G |  92   7   9  16
T |   1  74  11  16
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updated Mon Dec 16 23:09:44 2024