4efj_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF I-GZEII LAGLIDADG HOMING ENDONUCLEASE IN COMPLEX WITH DNA TARGET SITE (LAGLIDADG endonuclease)
reference	'To ? ? ? X-RAY DIFFRACTION
source	Gibberella zeae
experiment	X-ray (resolution=2.80, R-factor=0.188)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	4z1x_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4efj_B interface=18,20,22,24,29,31,35,37,60,65,69,71,174,178,185,187,191,193,217,218,223,225,227,229, sinpwfvtgftdaegsfMiHlEkNkdkwRvRptfQiKldirdkslleeiknyfnntgsiNtsnkEcvyKvRslkdisiiishfdkynlitqkkadfelfkkiinklnsqehlsyevgatvlqeiisirasmnlglsssvkedfphiipsnrplienmniphpewmagfvsgegSfsvYttsddkYvSlsfRvSqhnkdkqllksfvdffgcggfnyHNkgnkAvIfVtRkfedindkiiplfneykikgvkykdfkdwskvakmieskshlttngykeickikenmnsyrk
interface signature	MHENRRQKNEKRSYYSRSHNAIVR

Estimated binding specificities ?

readout + contact

# IC=24.026 IC/col=1.144 n_of_columns=21

specificity:

A |   8   5   0   0   4  83   0   4  96  96   0  83   4   0   0   0  96   0   0   0  96
C |   5   8   0   0   5   5  96  92   0   0   4   4   4   0   0   0   0  96  96  96   0
G |   8   4   0  96   4   4   0   0   0   0   4   4   9  96  96   0   0   0   0   0   0
T |  75  79  96   0  83   4   0   0   0   0  88   5  79   0   0  96   0   0   0   0   0

scan!

home
updated Thu Dec 22 00:57:29 2022