4z1x_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF LAGLIDADG HOMING ENDONUCLEASE I-GZEII IN COMPLEX WITH DNA TARGET (LAGLIDADG endonuclease)
reference	Stoddard et al. 'To ? ? ?
source	Fusarium graminearum PH-1
experiment	X-ray (resolution=2.80, R-factor=0.176)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
redundant complexes	4efj_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4z1x_A interface=18,20,22,29,31,35,37,60,65,69,71,174,178,185,187,189,191,193,215,217,218,223,227,229, sinpwfvtgftdaegsfMiHlEknkdkwRvRptfQiKldirdkslleeiknyfnntgsiNtsnkEcvyKvRslkdisiiishfdkynlitqkkadfelfkkiinklnsqehlsyevgatvlqeiisirasmnlglsssvkedfphiipsnrplienmniphpewmagfvsgegSfsvYttsddkYvSlSfRvSqhnkdkqllksfvdffgcggfNyHNkgnkAvifVtRkfedindkiiplfneykikgvkykdfkdwskvakmieskshlttngykeickikenmnsyrk
interface signature	MHERRQKNEKRSYYSSRSNHNAVR

Estimated binding specificities ?

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# IC=23.761 IC/col=1.131 n_of_columns=21

specificity:

A |   4   8   8   0   0  78   0   0  96  96   0  92  10   0   0   0  96   0   0   0  96
C |   4  17  10   0   0   4  96  96   0   0   4   0   4   0   0   0   0  96  96  96   0
G |   8   8  13  96   0   8   0   0   0   0   1   4   8  96  96   0   0   0   0   0   0
T |  80  63  65   0  96   6   0   0   0   0  91   0  74   0   0  96   0   0   0   0   0

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Dendrogram of similar interfaces ?

matrix format

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updated Thu Dec 22 21:01:29 2022