4gcl_EGH : 3D-footprint complex

structure name	STRUCTURE OF NO-DNA FACTOR
reference	Proc.Natl.Acad.Sci.USA 110 10586 2013
source	Escherichia coli
experiment	X-ray (resolution=2.65, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	4gck_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4gcl_E interface=26,36,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 4gcl_G interface=26,36,37,38,39,41,42, rnrreeilqslalmlessdgsqritTaklaasvgvSEAAlYRhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq > 4gcl_H interface=26,37,38,41, rnrreeilqslalmlessdgsqritTaklaasvgvsEAalYrhfpsktrmfdsliefiedslitrinlilkdekdttarlrlivllllgfgernpgltriltghalmfeqdrlqgrinqlferieaqlrqvlrekrmregegyatdetllasqilafcegmlsrfvrsefkyrptddfdarwpliaaqlq
interface signature	TSEAAYR/TSEAAYR/TEAY

Estimated binding specificities ?

readout + contact

# IC=12.405 IC/col=0.886 n_of_columns=14

specificity:

A |  96   0   0  20  24   0   0  68   0   9  24  82   0   0
C |   0   0   0  15  24   0   6   9  96  13  24   0  96   0
G |   0  96   0  48  24  96   1   6   0   6  24   0   0   0
T |   0   0  96  13  24   0  89  13   0  68  24  14   0  96

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updated Mon Jan 5 09:13:29 2026