| structure name | MOUSE ZFP57 ZINC FINGERS IN COMPLEX WITH METHYLATED DNA (Zinc finger protein 57) |
| reference | Zhang et al. 'Genes 26 2374 2012 |
| source | Mus musculus |
| experiment | X-ray (resolution=0.99, R-factor=0.132) |
| structural superfamily | beta-beta-alpha zinc fingers; |
| sequence family | Zinc finger, C2H2 type; |
| reference complex | 4m9v_C |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | DASRRSER |
Estimated binding specificities ?
| readout + contact |  |
A | 7 0 0 7 7 0 73 C | 7 0 96 73 7 96 7 G | 9 96 0 7 75 0 7 T | 73 0 0 9 7 0 9scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ZFP57 | ||
| TGCCGC | PubMed | 4gzn_C(8.73e-10) |
Dendrogram of similar interfaces ?
matrix format------DCATSC--RGRG----SGEG--RG L +4gzn_C +------1 PCYC--RG--DA--RG--RG--DCHG---- L ! +2prt_A +-4 ------EC--SCKGRG--LT--FCNA---- L ! ! +1ubd_C +-5 +------2 ------QAHTTT--QA--TTLAHGTCDTRG L ! ! +1g2d_F ! ! ----RGST--YGYC----QC--TGSTRGYT L +---------6 +--------4is1_C ! ! ------RGSGDCHGTT--RG--DAEC--RG L ! ! +1a1h_A --7 +---------3 ------LT--ETYC----NTYGQG------ L ! +4f6m_A ! ------KG--WTKA--------HCHG--RG L +-------------------1tf6_A |
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updated Thu Sep 12 19:24:47 2024