4h0e_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MUTANT ORR3 IN COMPLEX WITH NTD OF ARAR
reference	Nair et al. 'Nucleic 41 639 2013
source	Bacillus Subtilis
experiment	X-ray (resolution=1.97, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4h0e_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4h0e_A interface=32,33,42,43,44,47,63, efmlpkyaqvkeeisswinqgkilpdqkiptENelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva > 4h0e_B interface=43,53,54,55,58,74, levlfqgplgsefmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva
interface signature	ENSRHRQ/ESRHRQ

Estimated binding specificities ?

readout + contact

# IC=10.245 IC/col=0.931 n_of_columns=11

specificity:

A |   0   0  12  59   0   0   6  77   0  96  69
C |   0   0  19  13  96   0  13   0  96   0   8
G |   0  96   9  13   0  96  68  13   0   0  13
T |  96   0  56  11   0   0   9   6   0   0   6

scan!

home
updated Mon Sep 9 22:13:17 2024